BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB023G06SP1|AL428109
(995 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1174 1962 0.0
>3x_Contig1174
Length = 6106
Score = 1962 bits (989), Expect = 0.0
Identities = 993/995 (99%)
Strand = Plus / Minus
Query: 1 ggtcatcttctcaccaaaaatgggtttcatggcatcatcacatatgatttcccttcggtc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5225 ggtcatcttctcaccaaaaatgggtttcatggcatcatcacatatgatttcccttcggtc 5166
Query: 61 ctccgggttctgaaggtcatgctccttaatgtagtcccaaacagatttaacgacttgtgt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5165 ctccgggttctgaaggtcatgctccttaatgtagtcccaaacagatttaacgacttgtgt 5106
Query: 121 tctgggcatctcttccacttttaagaattcttgtaattcgggactcaatcctactttctt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5105 tctgggcatctcttccacttttaagaattcttgtaattcgggactcaatcctactttctt 5046
Query: 181 caagtgtatgctgttcggattatcgttagccaccttccgcttcttcttctttttaggttt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5045 caagtgtatgctgttcggattatcgttagccaccttccgcttcttcttctttttaggttt 4986
Query: 241 cttctcttttttcccactccgatggcgttttaacatggcaacttcgtcgtcatgcagctt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4985 cttctcttttttcccactccgatggcgttttaacatggcaacttcgtcgtcatgcagctt 4926
Query: 301 cactgcaagctttgaatccaaatccaccagttcttcatgttttagggttttactttgtaa 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4925 cactgcaagctttgaatccaaatccaccagttcttcatgttttagggttttactttgtaa 4866
Query: 361 atcttgtaatcgattgaaccgtgatatgatcagttctttcaaatcatgcttgtgagaatt 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4865 atcttgtaatcgattgaaccgtgatatgatcagttctttcaaatcatgcttgtgagaatt 4806
Query: 421 caaatctaccgaaaataactcctgtaacgctttccgtattctcttggcacttacttcctc 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4805 caaatctaccgaaaataactcctgtaacgctttccgtattctcttggcacttacttcctc 4746
Query: 481 tgggtttgacacgcttaagatggcctggtatggatattcacatcaatgtgatagtttgaa 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4745 tgggtttgacacgcttaagatggcctggtatggatattcacatcaatgtgatagtttgaa 4686
Query: 541 gtagttagtatcttgctcgaaaacgattcgcttgataaaaaagaaagggggaaacgtaca 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4685 gtagttagtatcttgctcgaaaacgattcgcttgataaaaaagaaagggggaaacgtaca 4626
Query: 601 tctatcataggaacatatctcttgagatcactcatttccgatcctggtgatctgccggca 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4625 tctatcataggaacatatctcttgagatcactcatttccgatcctggtgatctgccggca 4566
Query: 661 ccctgtgcaaataatattcccattcattctctcattctttgaggctctgactttgtttaa 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4565 ccctgtgcaaataatattcccattcattctctcattctttgaggctctgactttgtttaa 4506
Query: 721 agtataatgttgaaattttgtatacgcaaaaataccggctgtaggagggctttgaacctg 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4505 agtataatgttgaaattttgtatacgcaaaaataccggctgtaggagggctttgaacctg 4446
Query: 781 ataacggcagtaaaatggtcaatacgagaaagagtaagttggtctattatacagtttatg 840
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4445 ataacggcagtgaaatggtcaatacgagaaagagtaagttggtctattatacagtttatg 4386
Query: 841 taacctagtgtaaggtgtgtaatgcagttatatagtatgtaacgtttatttcacttggtt 900
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4385 taacctagtgtaaggtgtgtaatgcagttatatagtatgtaacgtttatttcacttggtt 4326
Query: 901 cttcaagtttcttttctgttgcaactggttcttctttatcaatctctttctttcggctct 960
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4325 cttcaagtttcttttctgttgcaactggttcttctttatcaatctctttctttcggctct 4266
Query: 961 gttcaaagttcttgggkcaatcaactcgtcttcgg 995
|||||||||||||||| ||||||||||||||||||
Sbjct: 4265 gttcaaagttcttgggtcaatcaactcgtcttcgg 4231
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 8809
Number of Sequences: 1807
Number of extensions: 8809
Number of successful extensions: 72
Number of sequences better than 1.0e-20: 1
length of query: 995
length of database: 10,358,551
effective HSP length: 16
effective length of query: 979
effective length of database: 10,329,639
effective search space: 10112716581
effective search space used: 10112716581
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.7 bits)